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Multidisciplinary Program in Infectious Disease

Introduction

The infectious disease research faculty of the Louisiana State University School of Veterinary Medicine (LSU SVM) encompasses a diverse, multi-disciplinary group whose combined expertise provides a unique resource for training future researchers in the molecular pathogenesis of infectious agents of animals. Faculty participating in this program have expertise in bacteriology, virology, parasitology, immunology, molecular genetics, and biotechnology. Participating research programs focus on infectious agents, on host responses to injury, and on the interaction between infectious agents and host responses. Molecular genetic approaches of the participating faculty include investigations concerning the genetic basis of pathogen virulence, molecular approaches to elucidate and enhance immune responses to infectious agents, and transgenic approaches to enhancing host resistance.

This diverse expertise, combined with well equipped laboratories and extensive animal holding facilities, provides students an opportunity to use modern molecular genetic techniques to manipulate infectious agents or their hosts, and to subsequently evaluate the impact of that manipulation in the host, using a variety of animal species. The combination of faculty expertise in molecular biology and the availability of animal systems at one institution provides a unique opportunity for graduate students. In addition, important courses are available that provide students with a basic understanding of infectious agents, host responses, and host pathogen interactions. The availability of faculty research expertise, excellent equipment resources, and pertinent course offerings is laid on the framework of specific graduate program guidelines that provide graduate students with a road map for successful and timely completion of their graduate program. Inquiries should be made to: Dr. Thomas R. Klei, Associate Dean for Research and Advanced Studies, School of Veterinary Medicine, Louisiana State University, Baton Rouge, LA 70803, klei@mail.vetmed.lsu.edu. For general information on graduate studies at LSU SVM, see The Advanced Studies Program.

Faculty (Click on link for biography and areas of research.)

The infectious disease faculty of the Louisiana State University School of Veterinary Medicine is in the forefront of research in the national need area of animal biotechnology. As the research area section indicates, projects on the pathogenesis of infectious diseases in animals encompass a wide variety of scientific approaches, which offers an enriched training ground for graduate students. The quality of the faculty and the program is most clearly indicated by success in obtaining extramural funding. In summary, current funding of the nine LSU/SVM infectious disease faculty includes 9 USDA National Research Initiative Competitive Grants totaling over $1.2 million; 7 USDA Special Grants totaling $130,450; 4 National Institutes of Health Grants totaling over $2.2 million; 4 grants from the National Sea Grant Program totaling $432,893; 9 industry and commodity group grants for $484,348; 6 grants from state agencies for $465,450; 1 grant from the US army for $1,400,000; and 4 grants from private foundations totaling $165,599. This amounts to a total of over $6.76 million in extramural funds. The faculty have used these funds to recruit top quality graduate students, post-doctoral associates, and research associates whose presence provide an active environment for scientific interaction.

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Facilities and Research Instrumentation. Excellent facilities and equipment are available to support research and train scientists in the pathogenesis of infectious diseases in animals. Depending on the funding source and the complexity of the equipment, it is either housed in individual faculty laboratories or in centralized laboratory units. Regardless of the location, however, cooperation between programs provides a unique environment in which equipment and facilities are shared between groups. Although considerable equipment has been provided by state appropriations, faculty have also been extremely successful in obtaining extramural equipment grants from a variety of sources, including the Louisiana Education Quality Support Fund, the USDA, and the NIH. All equipment is available for graduate students use.

All of the infectious disease research faculty have extensive space and state of the art equipment to conduct modern bio-technical research. Individual laboratories are equipped with all of the routine equipment to conduct experiments in molecular genetics, including specialized equipment like hybridization ovens, transblot equipment, and thermocyclers. Additional specialized equipment available to all laboratories includes a sonicator, a lyophilizer, shaking incubators, two superspeed and two ultraspeed centrifuges, an ELISA plate washer, a computer driven ELISA reader, a Savant Speed-Vac centrifuge, a gel dryer, a Beckman 640 spectrophotometer, an ultraviolet cross linking cabinet, and a Perkin-Elmer QPCR 5000 for quantitative PCR determinations.

Larger, more expensive equipment is available in the various centralized facilities available at the School of Veterinary Medicine. These facilities include BioMMED, the Microscopy Center, the Cell Culture and Monoclonal Antibody Lab, and the Flow Cytometry Laboratory. Although participating faculty are responsible for overseeing the function of these facilities, each lab has a state-funded, full-time instructor or research associate responsible for the technical operation of the equipment. These personnel provide experience and technical expertise that is invaluable to our graduate students. Extensive animal holding facilities are available for research animals. The Division of Laboratory Animal Medicine (DLAM) of the LSU/SVM regulates all animal research at Louisiana State University. DLAM and its facilities are accredited by the American Association for the Accreditation of Laboratory Animal Care (AAALAC). This facility and supporting staff assist researchers in acquiring, conditioning and maintaining animals used in research. The facility contains 15,460 sq. ft. of small animal holding space, 5,550 sq. ft. of large animal holding space, and 5300 sq. ft. is for aquatic species. Large animals are housed at the LSU/SVM, on Central Station pastures or in two barns designed to maintain disease free livestock. DLAM also maintains a BL3-level biocontainment facility that complies with published BL3-level containment standards. Aquatic animal facilities include the Aquatic Pathobiology Lab, a 4000 ft2 facility with 9 wet labs and two dry labs. Wet labs are equipped with numerous 120-L fiberglass and 20-L plastic tanks, and have water temperature and photo-period control. In addition, the facilities of the Aquaculture Research Station are available as needed.

Louisiana State University has several libraries of importance to students in the biological sciences. Middleton Library, the main library, has greater than 2,400,000 volumes, 3,500,000 volumes on microfilm and 7,000,000 manuscripts. Special collections related to chemistry, biochemistry and chemical engineering are located at the Chemistry Library in Williams Hall. The Veterinary Medicine Library, located in the School of Veterinary Medicine, has holdings of over 40,000 volumes and currently subscribes to over 1000 scientific journals and periodicals dealing with subjects related to animal biotechnology, molecular biology, immunology, virology, genetics, aspects of veterinary medicine, comparative medicine and animal sciences. The library also has the computerized literature retrieval services, MEDLINE, VetCD and BEAST, on CD-ROM , with MEDLINE available through the network. In addition, the library is served by LALINK, a computer network consisting of all the libraries in the State of Louisiana.

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Computer Resources. All laboratories and offices are equipped with PC-compatible computers and printers that are hardwired into the LSU computer network. Several software programs for evaluation of molecular and sequence data are available, including Plasmid Enhance (Scientific and Educational Software, State Line, PA) and to PCGene (Intelligenetics). These computers also provide network access to the Wisconsin Package (Genetics Computer Group, Madison, WI) on a constellation of micro-Vax computers in the Department of Biochemistry. In addition, the Veterinary Computer Resources unit maintains a computer lab for graduate students containing 10 Pentium 400 PCs that are all connected to the network.

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Pertinent Courses

General:

PBS 7001 Seminar: Veterinary Medical Sciences (1) Reports and discussions of new developments in veterinary bacteriology, immunology, parasitology and virology; emphasis on infectious disease research. Students are required to take this course 2 times, once early in their program of study to present a research proposal and once at the end of their program to present their completed studies.

PBS 7002 Veterinary Medical Research Techniques (1-4) Specialized research techniques related to a specific discipline of veterinary microbiology and parasitology. Students will utilize this course in order to rotate through at least three research laboratories to familiarize themselves with different experimental approaches and techniques. Students register for 1-4 hrs per semester, for a maximum of 8 hrs credit.

BIOL 7280 Nucleic Acids (3) Chemistry and biochemistry of nucleic acids; structure expression, and regulation of genes in prokaryotic and eukaryotic organisms.

BIOL 7163 Advanced Technology of Molecular Biology. (3) Methods in recombinant DNA procedures; isolation of DNA from prokaryotic or eukaryotic sources; DNA cloning; restriction mapping and DNA sequencing.

PBS 7423 Cellular and Molecular Immunology (3) Cellular and molecular basis for the immune response; emphasis on molecular structure and function of antibodies and other receptors; role of lymphocyte subsets and cytokines in regulation of immune responses.

PBS 7417 Immune Response to Infectious and Parasitic Agents (3) Immune mechanisms in controlling or exacerbating disease caused by bacteria, viruses, protozoa, helminths, and arthropods; modern principles of vaccine development and trends in application.

EXST 7004 Experimental Statistics I (3) Basic concepts of statistical models and samples; measures of variation and central tendency; normal, t, chi-square, and F distributions; test of hypothesis, analysis of variance, regression, and correlation; emphasis on laboratory-oriented sciences research problems; computer software applications.

EXST 7014 Experimental Statistics II (3) Multiple classification analysis of variance and covariance, individual degrees of freedom, factorial arrangement of treatments, and multiple regressions; emphasis on science/laboratory research problems.

Specialty Courses:

Molecular Genetics:

BIOL 4132 Eukaryotic Molecular Genetics (3) Molecular genetics, primarily in higher eukaryotes; gene structure and packaging in chromosomes; gene transcription and mRNA processing; translation; gene regulation; genetics in development; genetics of cancer; immunogenetics; genetic engineering in eukaryotes.

BIOL 4246 Microbial Genetics (3) Microbial genetic principles; mutation, conjugation, transformation, recombination, transduction, gene expression, molecular biology of bacteriophage and plasmids; recombinant DNA technology.

BIOL 4400 Molecular Genetics Laboratory (3) Current techniques used to genetically engineer microorganisms, study gene expression and DNA modification, and identify organisms by specific genetic alleles; computer analysis of DNA and protein sequences.

BIOL 4450 Molecular Regulation of Cell Function (3) Molecular organization of eukaryotic cells; gene structure and function; molecular regulation of signal transduction and cell cycle.

Infectious Disease:

PBS 7003 Special Topics in Veterinary Medicine (1-4) Topics in veterinary bacteriology, immunology, molecular biology, parasitology and virology; emphasis on infectious disease. This course offers the opportunity for faculty to offer new course material and for graduate students to pursue independent study under faculty guidance. It is also the umbrella course for Journal Clubs, which provide students an opportunity to evaluate, analyze and orally present current scientific literature. Students can enroll for 1-4 credits per semester, for a maximum of 8 credit hours, 2 of which can be Journal Club, although Journal Club participation is encouraged throughout a student’s program.

PBS 7411 Molecular Mechanisms of Viral Pathogenesis (3) Virus-host interactions in disease induction emphasizing virus receptors and cell tropism, persistence and latency, oncogenesis, virus-induced immune suppression, and adverse responses of the host.

PBS 7410/BIOL 7289 Biochemistry of Viruses (3) Biochemistry and molecular biology of representative bacterial, animal, and plant viruses; virus attachment to and penetration of host cells; replication, transcription, and translation of viral genes; virion morphogenesis and assembly; virus-induced host cell modifications; emphasis on structure-function relationships. .

PBS 7432 Cell and Organ Culture Techniques in Biomedical Research (3) Application of cell and organ culture techniques to current research problems.

PBS 7413 Cellular and Molecular Immunology Laboratory (3) Laboratory techniques in modern immunology; isolation, identification, and functional testing of proteins and cells of the immune system.

PBS 7404 Pathogenic Mechanisms of Bacteria (3) Relation of bacterial structure and function to the induction of disease: virulence factors, mechanisms of host-parasite interaction, vaccine strategies.

PBS 7405 Bacterial Pathogenesis Laboratory (1-3) Laboratory techniques for selected topics in bacterial pathogenesis.

PBS 7415 Current Experimental Methods in Parasitology (1-4) Specialized laboratory methods used to produce experimental infections, diagnose parasitism and recover and identify protozoan and helminth parasites of ruminants, horses, pigs, and companion animals.

PBS 7419 Population Dynamics and Ecology of Parasitic and Vector-Borne Diseases (3) Population regulation and distribution of parasitic and vector-borne diseases of veterinary and medical significance; disease risk in populations and control strategies based on population models, transmission dynamics, climate, nutrition, immunity, geographic information systems, and herd health programs.

PBS 7421 Zoonotic Infections and Parasitic Diseases (3) Epidemiology, ecology, and control of major infectious and parasitic zoonoses.

PBS 7301 Principles and Methods of Epidemiology and Disease Control (4) Ecologic and epidemiologic concepts used in studying diseases in populations; epidemiologic methods, with laboratory exercises emphasizing problem solving, epidemiologic principles applied to disease control; planning, administration, and evaluation of disease-control programs.

PBS 7002 Veterinary Medical Research Techniques: SAS (3) Probability distributions as models for real-world processes: sampling distributions; principles of hypothesis testing.

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